STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SY39_LOXAFUncharacterized protein. (651 aa)    
Predicted Functional Partners:
EXOSC10
Exosome component 10.
   
 0.802
MTREX
Mtr4 exosome RNA helicase.
   
 0.798
YTHDC2
YTH domain containing 2.
   
 0.783
EXOSC8
Exosome component 8.
   
 0.780
EXOSC5
Exosome component 5.
   
 0.769
EXOSC7
Exosome component 7.
   
 0.758
XRN1
5'-3' exoribonuclease 1.
   
 0.758
EXOSC1
Exosome component 1.
   
 0.758
EXOSC9
Exosome component 9.
   
 0.749
EXOSC3
Exosome component 3.
   
 0.741
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.