STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEMIPCell migration inducing hyaluronidase 1. (1363 aa)    
Predicted Functional Partners:
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
    
 0.693
TMC1
Transmembrane channel-like protein.
    
 0.565
ZFAND5
Zinc finger AN1-type containing 5.
      
 0.484
C9orf85
Chromosome 9 open reading frame 85.
      
 0.483
TRPM1
Transient receptor potential cation channel subfamily M member 1.
      
 0.463
TRPM3
Transient receptor potential cation channel subfamily M member 3.
      
 0.463
SIAE
Sialic acid acetylesterase.
    
   0.425
MELK
Non-specific serine/threonine protein kinase.
      
 0.401
SLC30A5
Solute carrier family 30 member 5.
      
 0.400
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
      
 0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.