STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP1TNF alpha induced protein 1. (316 aa)    
Predicted Functional Partners:
UBXN1
UBX domain protein 1.
   
 
 0.923
UBXN7
UBX domain-containing protein 7.
    
 
 0.920
FAF1
Fas associated factor 1.
    
 
 0.918
KCTD13
Potassium channel tetramerization domain containing 13.
  
 
 
0.788
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.775
RND2
Rho family GTPase 2.
    
 0.706
KCTD10
Potassium channel tetramerization domain containing 10.
  
  
0.697
RND3
Rho family GTPase 3.
    
 0.601
ARIH1
RBR-type E3 ubiquitin transferase.
    
 0.537
PCNX3
Pecanex 3.
      
 0.524
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.