STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP1TNF alpha induced protein 1. (316 aa)    
Predicted Functional Partners:
KCTD13
Potassium channel tetramerization domain containing 13.
   
   0.962
KCTD10
Potassium channel tetramerization domain containing 10.
   
   0.956
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.949
UBXN1
UBX domain protein 1.
   
 
 0.942
UBXN7
UBX domain-containing protein 7.
    
 
 0.936
FAF1
Fas associated factor 1.
    
 
 0.935
USP25
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.795
DNAJB5
DnaJ heat shock protein family (Hsp40) member B5.
    
   0.749
FLNC
Filamin C.
   
 
 0.744
RND2
Rho family GTPase 2.
    
 0.740
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.