STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CASQ1Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (393 aa)    
Predicted Functional Partners:
RYR1
Ryanodine receptor 1.
   
 0.912
RYR2
Ryanodine receptor 2.
   
 0.899
G3SZS8_LOXAF
Uncharacterized protein.
   
 0.899
G3TTP7_LOXAF
Uncharacterized protein.
   
 0.899
ASPH
Aspartate beta-hydroxylase.
   
 0.882
RYR3
Ryanodine receptor 3.
   
 0.849
MYOZ1
Myozenin 1.
   
  
 0.798
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
     
  0.762
MYOM2
Myomesin 2.
   
 0.748
MYL1
Myosin light chain 1.
   
 0.701
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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