Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ASPSCR1TUG-UBL1 domain-containing protein. (260 aa)    
Predicted Functional Partners:
UBXN2A
UBX domain protein 2A.
    
 0.970
NSFL1C
NSFL1 cofactor.
    
 0.963
UBXN2B
UBX domain protein 2B.
    
 0.963
UBXN7
UBX domain-containing protein 7.
    
 
 0.961
FAF1
Fas associated factor 1.
    
 0.958
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.956
UBXN6
UBX domain protein 6.
   
 
 0.951
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.947
UBXN10
UBX domain protein 10.
    
 
 0.938
SLC2A4
Solute carrier family 2 member 4; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.874
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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