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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPSCR1TUG-UBL1 domain-containing protein. (260 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 
 0.995
NSFL1C
NSFL1 cofactor.
    
 
 0.945
UBXN2B
UBX domain protein 2B.
    
 
 0.945
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.944
UBXN6
UBX domain protein 6.
   
 
 0.940
UBXN10
UBX domain protein 10.
    
 
 0.938
UBXN2A
UBX domain protein 2A.
    
 
 0.938
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.932
FAF1
Fas associated factor 1.
    
 
 0.928
FAAP100
FA core complex associated protein 100.
   
 
 0.795
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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