STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC5Small nuclear RNA activating complex polypeptide 5. (99 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.997
G3TJ62_LOXAF
Uncharacterized protein.
    
 0.994
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.993
SNAPC2
Small nuclear RNA activating complex polypeptide 2.
    
 0.988
GTF2B
General transcription factor IIB.
    
 0.876
POU2F1
POU domain protein.
    
  0.864
GTF2A1
General transcription factor IIA subunit 1.
    
  0.805
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
  0.805
GTF2A2
General transcription factor IIA subunit 2.
    
  0.780
POLR2K
Uncharacterized protein.
    
 0.763
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.