Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO3LIM domain only 3. (144 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.846
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.821
LDB2
LIM domain binding 2.
    
 0.806
GATA3
GATA binding protein 3.
    
 0.632
LHX9
LIM homeobox 9.
   
 
 0.598
LHX2
LIM homeobox 2.
   
 
 0.598
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.597
LFNG
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.597
GATA2
GATA binding protein 2.
    
 0.563
GATA1
GATA binding protein 1.
    
 0.560
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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