Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAMD7Sterile alpha motif domain containing 7. (450 aa)    
Predicted Functional Partners:
OPN1SW
Opsin 1, short wave sensitive.
      
 0.829
SAMD14
Sterile alpha motif domain containing 14.
      
 0.538
OTOS
Otospiralin.
   
  
 0.517
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.516
ALPL
Alkaline phosphatase.
      
 0.496
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.489
G3TZF6_LOXAF
SAM domain-containing protein.
    
 
 0.482
SMAD7
Mothers against decapentaplegic homolog.
      
 0.473
G3THQ5_LOXAF
RING-type domain-containing protein.
     
 0.462
PHC2
Polyhomeotic homolog 2.
     
0.453
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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