STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC62SEC62 homolog, preprotein translocation factor. (390 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
   
 0.996
SEC61B
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.920
SEC61G
SEC61 translocon gamma subunit.
   
 
 0.920
SPCS1
Signal peptidase complex subunit 1.
   
 
 0.851
SPCS2
Signal peptidase complex subunit 2.
   
 
 0.848
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.828
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.828
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
     
 0.799
STK39
Serine/threonine kinase 39.
    
 
 0.778
OXSR1
Protein kinase domain-containing protein.
    
 
 0.778
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.