Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNNT2Troponin T2, cardiac type. (293 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.977
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.972
TNNI1
Troponin I1, slow skeletal type.
 
 
 0.961
TNNI2
Troponin I2, fast skeletal type.
   
 0.943
TNNC2
Troponin C2, fast skeletal type.
   
 0.927
TPM2
Tropomyosin 2; Belongs to the tropomyosin family.
   
 0.926
TPM4
Tropomyosin 4; Belongs to the tropomyosin family.
   
 0.895
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.895
TPM3
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.895
MYL1
Myosin light chain 1.
   
 0.865
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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