Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KLRF1Killer cell lectin like receptor F1. (233 aa)    
Predicted Functional Partners:
CD69
CD69 molecule.
   
 0.781
G3TR49_LOXAF
MHC_I-like_Ag-recog domain-containing protein.
    
 0.672
NR1I2
Nuclear receptor subfamily 1 group I member 2.
    
 
 0.637
GBA
Glucosylceramidase.
      
 0.618
INPP5D
Inositol polyphosphate-5-phosphatase D.
     
 0.618
CD247
CD247 molecule.
   
  
 0.613
STX18
Syntaxin 18.
    
   0.559
FIBCD1
Fibrinogen C domain containing 1.
   
 0.555
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
  0.542
GZMK
Granzyme K; Belongs to the peptidase S1 family.
   
 0.541
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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