STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF318Zinc finger protein 318. (2037 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.732
SRSF2
RRM domain-containing protein.
   
 0.711
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.693
HINFP
Histone H4 transcription factor.
      
 0.689
ZMYM4
Zinc finger MYM-type containing 4.
   
 0.688
YLPM1
YLP motif containing 1.
   
  
 0.674
ALYREF
Aly/REF export factor.
   
 0.656
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.656
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.646
G3TV31_LOXAF
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.646
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.