STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS3BCAS3 microtubule associated cell migration factor. (824 aa)    
Predicted Functional Partners:
C16orf70
Chromosome 16 open reading frame 70.
   
 
 0.845
BCAS4
Breast carcinoma amplified sequence 4.
      
 0.714
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 
 0.638
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
      
 0.579
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.578
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 
 0.549
SEL1L3
SEL1L family member 3.
   
  
 0.533
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
      
 0.516
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
      
 0.478
ZFYVE1
Zinc finger FYVE-type containing 1.
   
  
 0.473
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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