STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCAS3BCAS3 microtubule associated cell migration factor. (824 aa)    
Predicted Functional Partners:
C16orf70
Chromosome 16 open reading frame 70.
   
 
 0.956
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 
 0.941
BCAS4
Breast carcinoma amplified sequence 4.
      
 0.808
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 
 0.734
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.675
SEL1L3
SEL1L family member 3.
   
  
 0.590
SUSD4
Sushi domain containing 4.
      
 0.550
DTNBP1
Uncharacterized protein.
      
 0.536
EFCAB3
EF-hand calcium binding domain 3.
    
 
 0.508
AFG1L
AFG1 like ATPase.
      
 0.505
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.