STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCC2GRIP and coiled-coil domain containing 2. (1692 aa)    
Predicted Functional Partners:
STX10
Syntaxin 10; Belongs to the syntaxin family.
   
 
 0.947
RAB9B
RAB9B, member RAS oncogene family.
     
 0.946
RAB9A
RAB9A, member RAS oncogene family.
     
 0.946
RAB6B
RAB6B, member RAS oncogene family.
    
 0.926
RANGAP1
Ran GTPase activating protein 1.
   
 0.853
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.831
NUP155
Nucleoporin 155.
   
 0.813
NUP54
Nucleoporin 54.
   
 0.813
NUP214
Nucleoporin 214.
   
 0.799
RAB6A
RAB6A, member RAS oncogene family.
    
 0.798
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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