STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL6BBCL6B transcription repressor. (472 aa)    
Predicted Functional Partners:
BCORL1
BCL6 corepressor like 1.
    
 0.776
BCL6
BCL6 transcription repressor.
    
   0.760
DMRT1
Uncharacterized protein.
    
 0.617
FBXO11
F-box protein 11.
    
 0.616
NCOR2
Nuclear receptor corepressor 2.
    
 0.603
NCOR1
Nuclear receptor corepressor 1.
    
 0.603
SULT4A1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
   0.597
G3UAE0_LOXAF
BHLH domain-containing protein.
      
 0.596
ETV5
ETS variant 5.
    
 0.562
ATOH8
Atonal bHLH transcription factor 8.
    
 
 0.512
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.