STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX19BDEAD-box helicase 19B. (479 aa)    
Predicted Functional Partners:
DDX19A
DEAD-box helicase 19A.
  
  
 
0.900
NUP214
Nucleoporin 214.
    
 
 0.790
GLE1
GLE1 RNA export mediator.
    
 
 0.786
CTIF
Cap binding complex dependent translation initiation factor.
    
 
 0.656
XPO1
Exportin 1.
    
 
 0.465
NUP88
Nucleoporin 88.
   
 
 0.422
RAE1
Ribonucleic acid export 1.
   
  
 0.414
ZC3H14
Zinc finger CCCH-type containing 14.
   
 
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.