STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX19ADEAD-box helicase 19A. (478 aa)    
Predicted Functional Partners:
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
      
 0.756
NUP214
Nucleoporin 214.
    
 
 0.739
NUP88
Nucleoporin 88.
    
 
 0.701
CTIF
Cap binding complex dependent translation initiation factor.
    
   0.685
GLE1
GLE1 RNA export mediator.
    
 
 0.681
DDX25
DEAD-box helicase 25.
    
   0.666
XPO1
Exportin 1.
    
 
 0.594
ZC3H14
Zinc finger CCCH-type containing 14.
   
 
 0.516
NUP62
Nucleoporin 62.
   
 
 0.501
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
  
0.491
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.