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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COX17Cytochrome c oxidase copper chaperone COX17. (63 aa)    
Predicted Functional Partners:
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 0.970
SCO1
SCO cytochrome c oxidase assembly protein 1.
    
 
 0.822
GFER
Sulfhydryl oxidase.
   
 0.782
COA5
Cytochrome c oxidase assembly factor 5.
   
  
 0.761
COX11
Cytochrome c oxidase copper chaperone COX11.
   
  
 0.746
CCS
Copper chaperone for superoxide dismutase.
    
 0.743
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 
 0.737
PUM1
Pumilio RNA binding family member 1.
    
 
 0.724
PUM2
Pumilio RNA binding family member 2.
    
 
 0.724
PET117
PET117 cytochrome c oxidase chaperone.
   
  
 0.724
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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