Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
STBD1Starch binding domain 1. (351 aa)    
Predicted Functional Partners:
GBE1
1,4-alpha-glucan branching enzyme 1.
    
 
 0.740
G3T2J1_LOXAF
Uncharacterized protein.
   
  
 0.737
G3TGQ4_LOXAF
Uncharacterized protein.
   
  
 0.737
G3UJJ0_LOXAF
Uncharacterized protein.
   
  
 0.737
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
    
 
 0.734
GYG2
Glycogenin 2.
   
 
 0.573
PHKG1
Phosphorylase kinase catalytic subunit gamma 1; Belongs to the protein kinase superfamily.
      
 0.550
GYS2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.533
GYS1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.533
GYG1
Glycogenin 1.
   
 
 0.531
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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