Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRAPBRCA1 associated protein. (594 aa)    
Predicted Functional Partners:
KSR1
Kinase suppressor of ras 1.
    
 0.974
KSR2
Kinase suppressor of ras 2.
    
 0.948
UBC
Uncharacterized protein.
 
  
 0.946
UBB
Ubiquitin B.
 
  
 0.904
RRAS2
RAS related 2.
    
  0.875
MRAS
Muscle RAS oncogene homolog.
    
  0.875
RRAS
RAS related.
    
  0.875
EVC
EvC ciliary complex subunit 1.
    
 
 0.834
HECTD4
HECT domain E3 ubiquitin protein ligase 4.
      
 0.827
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
  
 0.821
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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