STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFAND6Zinc finger AN1-type containing 6. (223 aa)    
Predicted Functional Partners:
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.729
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
   
 0.729
PEX6
Peroxisomal biogenesis factor 6.
     
 0.700
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.668
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.600
G3U9C8_LOXAF
Ubiquitin-like domain-containing protein.
    
 0.600
APLF
Aprataxin and PNKP like factor.
      
 0.568
PEX1
Peroxisomal biogenesis factor 1.
   
 
 0.563
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
      
 0.517
PEX10
Peroxisomal biogenesis factor 10.
     
 0.492
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.