STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP5CSerine/threonine-protein phosphatase. (459 aa)    
Predicted Functional Partners:
PTGES3
CS domain-containing protein.
    
 0.958
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.933
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
    
 0.896
HSP90AA1
HATPase_c domain-containing protein.
    
 0.896
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.870
CHORDC1
Cysteine and histidine rich domain containing 1.
   
 0.863
MAP3K6
Mitogen-activated protein kinase kinase kinase 6.
    
 0.861
CDC37
Cell division cycle 37.
    
 0.854
LOC100674165
Uncharacterized protein.
    
 0.847
G3ULS6_LOXAF
Uncharacterized protein.
    
 0.844
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.