STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTBK2Tau tubulin kinase 2. (1174 aa)    
Predicted Functional Partners:
CEP89
Centrosomal protein 89.
     
 0.804
G3UH79_LOXAF
Uncharacterized protein.
      
 0.794
CEP164
Centrosomal protein 164.
    
 0.769
G3UFI2_LOXAF
WW domain-containing protein.
    
 0.769
IFT88
Intraflagellar transport 88.
    
 0.759
ATXN7L2
Ataxin 7 like 2.
    
 
 0.754
G3UMU6_LOXAF
Uncharacterized protein.
    
 
 0.739
CEP19
Centrosomal protein 19.
      
 0.737
FAM83E
Family with sequence similarity 83 member E.
    
 0.723
CEP350
Centrosomal protein 350.
   
 
 0.718
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.