STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCNDecorin; May affect the rate of fibrils formation. (360 aa)    
Predicted Functional Partners:
CCDC80
Coiled-coil domain containing 80.
   
 0.994
IGFBP7
Insulin like growth factor binding protein 7.
   
 
 0.993
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.986
EGFR
Receptor protein-tyrosine kinase.
    
 0.955
COL3A1
Collagen type III alpha 1 chain.
   
 0.955
LUM
Lumican.
  
  
0.951
COL1A2
Collagen type I alpha 2 chain.
   
 0.951
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.933
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
    
 0.931
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.924
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.