Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RTN4IP1Reticulon 4 interacting protein 1. (397 aa)    
Predicted Functional Partners:
PYM1
PYM homolog 1, exon junction complex associated factor.
    
   0.803
RTN4
Reticulon.
    
 
 0.673
TMEM126A
Transmembrane protein 126A.
   
  
 0.639
MRPL30
Ribosomal_L30 domain-containing protein.
      
 0.629
ACADM
Acyl-CoA dehydrogenase medium chain.
  
 0.628
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
  
 0.597
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
  
 0.594
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
  
  
 0.573
LRRC14
Leucine rich repeat containing 14.
     
 0.569
SCML4
SAM domain-containing protein.
    
 
 0.548
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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