STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4IP1Reticulon 4 interacting protein 1. (397 aa)    
Predicted Functional Partners:
RTN4
Reticulon.
    
 
 0.724
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
  
  
 0.595
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
  
 0.577
FASN
Fatty acid synthase.
  
 0.555
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.553
ACADM
Acyl-CoA dehydrogenase medium chain.
  
 0.548
TMEM126A
Transmembrane protein 126A.
   
  
 0.543
VWA8
Von Willebrand factor A domain containing 8.
    
 
 0.523
MRPL30
Ribosomal_L30 domain-containing protein.
      
 0.512
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.509
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.