Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLF6Kruppel like factor 6. (297 aa)    
Predicted Functional Partners:
SP1
Sp1 transcription factor.
    
 0.828
KLF7
Kruppel like factor 7.
   
  
 0.827
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 
 0.656
TCF7L1
Transcription factor 7 like 1.
    
 0.649
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.628
ODF1
Outer dense fiber of sperm tails 1.
      
 0.622
SYT13
Synaptotagmin 13.
    
 
 0.621
E2F1
E2F transcription factor 1.
    
 0.617
JUN
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.616
CCIN
Calicin.
    
 0.614
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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