STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF6Kruppel like factor 6. (297 aa)    
Predicted Functional Partners:
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.658
TCF7L1
Transcription factor 7 like 1.
    
 0.650
JUN
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.612
PBX2
PBX homeobox 2.
    
 0.518
SP1
Sp1 transcription factor.
    
0.514
ERI3
ERI1 exoribonuclease family member 3.
      
 0.496
CHI3L1
Chitinase 3 like 1; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.470
GCM1
Glial cells missing transcription factor 1.
    
 
 0.447
SIN3B
SIN3 transcription regulator family member B.
    
 
 0.423
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.423
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.