STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD109CD109 molecule. (1442 aa)    
Predicted Functional Partners:
CFP
Complement factor properdin.
   
 0.680
CBX8
Chromobox 8.
    
 0.626
CBX2
Chromobox 2.
    
 0.597
G3SVD7_LOXAF
Uncharacterized protein.
    
 0.593
G3THQ5_LOXAF
RING-type domain-containing protein.
    
 0.575
PCGF2
Polycomb group ring finger 2.
    
 0.575
SLC4A9
Anion exchange protein.
      
 0.571
SLC4A7
Anion exchange protein.
      
 0.571
SLC4A2
Anion exchange protein.
      
 0.570
AMIGO3
Adhesion molecule with Ig like domain 3.
    
 0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.