STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Nuclear RNA export factor 1. (617 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
    
 0.967
RAE1
Ribonucleic acid export 1.
    
 0.962
NXT2
Nuclear transport factor 2 like export factor 2.
    
 0.958
NXT1
Nuclear transport factor 2 like export factor 1.
    
 0.958
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.938
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.936
THOC5
THO complex 5.
    
 0.936
NUP42
Nucleoporin 42.
    
 0.930
G3SLM1_LOXAF
Uncharacterized protein.
  
  
 
0.902
G3TWC5_LOXAF
Uncharacterized protein.
  
  
 
0.902
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.