STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VTCN1V-set domain containing T cell activation inhibitor 1. (280 aa)    
Predicted Functional Partners:
CTLA4
Cytotoxic T-lymphocyte associated protein 4.
    
 0.511
CD274
CD274 molecule.
   
 0.508
BTLA
B and T lymphocyte associated.
      
 0.502
GABRP
Gamma-aminobutyric acid type A receptor pi subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.489
CEACAM19
Carcinoembryonic antigen related cell adhesion molecule 19.
      
 0.473
G3SY39_LOXAF
Uncharacterized protein.
    
 0.465
ICOS
Inducible T cell costimulator.
    
 0.459
ICOSLG
Uncharacterized protein.
     
 0.449
PDCD1
Programmed cell death 1.
    
 0.435
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.