STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAT1T cell receptor associated transmembrane adaptor 1. (181 aa)    
Predicted Functional Partners:
CD3G
CD3g molecule.
   
 
 0.843
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.820
SH2D1A
SH2 domain containing 1A.
   
  
 0.782
CD3D
Ig_4 domain-containing protein.
   
 
 0.771
G3U502_LOXAF
Ig_4 domain-containing protein.
   
 
 0.771
CD247
CD247 molecule.
   
 0.764
TESPA1
Thymocyte expressed, positive selection associated 1.
   
  
 0.760
MRPS23
Mitochondrial ribosomal protein S23.
      
 0.731
TMLHE
Trimethyllysine hydroxylase, epsilon.
      
 0.731
CD3E
CD3e molecule.
   
 
 0.726
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.