Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANGPTL1Angiopoietin like 1. (489 aa)    
Predicted Functional Partners:
ANGPTL8
Angiopoietin like 8.
    
 0.713
TEK
TEK receptor tyrosine kinase.
   
 0.690
FGG
Fibrinogen gamma chain.
  
 
 
0.684
FGB
Fibrinogen beta chain.
  
 
 
0.666
ANGPT4
Angiopoietin 4.
  
  
0.622
ANGPTL6
Angiopoietin like 6.
  
 
0.595
FGL2
Fibrinogen like 2.
  
 
 
0.578
FGA
Fibrinogen alpha chain.
   
 
0.577
ANGPTL3
Angiopoietin like 3.
   
 
0.571
TIE1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
   
 0.552
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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