STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT23Keratin 23; Belongs to the intermediate filament family. (422 aa)    
Predicted Functional Partners:
G3STC6_LOXAF
Uncharacterized protein.
      
 0.595
KRT80
Keratin 80; Belongs to the intermediate filament family.
     
 0.595
GNG13
G protein subunit gamma 13.
   
  
 0.584
MREG
Melanoregulin.
      
 0.572
SEPTIN8
Septin 8; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
      
 0.505
RASL10B
RAS like family 10 member B.
      
 0.489
KRT8
Keratin 8; Belongs to the intermediate filament family.
    
 0.458
PPL
Periplakin.
   
  
 0.452
KRT7
Keratin 7; Belongs to the intermediate filament family.
   
 
 0.429
VAT1L
Vesicle amine transport 1 like.
      
 0.415
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.