STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUDT1Nudix hydrolase 1; Belongs to the Nudix hydrolase family. (156 aa)    
Predicted Functional Partners:
G3SWU1_LOXAF
M20_dimer domain-containing protein.
    
 
 0.778
MUTYH
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
      
 0.701
NUDT22
Nudix hydrolase 22.
   
  
 0.697
OGG1
8-oxoguanine DNA glycosylase.
      
 0.694
NUDT5
Nudix hydrolase 5; Belongs to the Nudix hydrolase family.
    
 
 0.641
NUDT14
Nudix hydrolase 14.
   
 
 0.625
NUDT18
Nudix hydrolase 18; Belongs to the Nudix hydrolase family.
      
 0.601
NUDT13
Nudix hydrolase 13.
      
 0.563
NUDT17
Nudix hydrolase 17.
      
 0.554
NUDT15
Nudix hydrolase 15; Belongs to the Nudix hydrolase family.
      
 0.552
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.