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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F6Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter. (371 aa)    
Predicted Functional Partners:
FAF2
Fas associated factor family member 2.
   
  
 0.775
OTUD4
OTU deubiquitinase 4.
   
  
 0.704
UBQLN4
Ubiquilin 4.
    
 
 0.684
FBXO6
F-box protein 6.
      
 0.650
NTRK1
Tyrosine-protein kinase receptor.
    
 
 0.606
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
      
 0.589
SLC35B2
Solute carrier family 35 member B2.
      
 0.586
HDAC5
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
  
 0.583
UAP1L1
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1.
   
  
 0.577
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
      
 0.541
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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