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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM2Zinc finger SWIM-type containing 2. (628 aa)    
Predicted Functional Partners:
TSNAXIP1
Translin associated factor X interacting protein 1.
   
 0.543
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.543
EBNA1BP2
EBNA1 binding protein 2.
      
 0.527
CCDC146
Coiled-coil domain containing 146.
   
 
 0.526
RSPH14
Uncharacterized protein.
      
 0.521
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.457
DLEC1
Uncharacterized protein.
    
 
 0.447
LRRC34
Leucine rich repeat containing 34.
   
  
 0.447
SLC66A1
Solute carrier family 66 member 1.
      
 0.443
CFAP52
Cilia and flagella associated protein 52.
    
 0.436
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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