STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Integrin alpha FG-GAP repeat containing 1. (523 aa)    
Predicted Functional Partners:
SLC24A3
Solute carrier family 24 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.738
NME4
NME/NM23 nucleoside diphosphate kinase 4; Belongs to the NDK family.
    
 
 0.644
DENND5B
DENN domain containing 5B.
      
 0.625
PHKB
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
   
  
 0.609
MRPL19
Mitochondrial ribosomal protein L19.
      
 0.589
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.576
GPR22
G protein-coupled receptor 22.
      
 0.572
CLEC12B
C-type lectin domain family 12 member B.
      
 0.570
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.565
ANAPC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
      
 0.557
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.