STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK3SRSF protein kinase 3. (565 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
   0.675
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.610
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.610
G3TV31_LOXAF
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.610
SRSF6
Serine and arginine rich splicing factor 6.
   
 
 0.610
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.610
ZNF318
Zinc finger protein 318.
    
 
 0.549
SRSF1
Uncharacterized protein.
    
 
 0.517
RBM23
RNA binding motif protein 23.
    
 
 0.481
RBM39
RNA binding motif protein 39.
    
 
 0.481
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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