Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBX3Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.934
CBX1
Chromobox 1.
   
 
 0.932
E2F6
E2F transcription factor 6.
   
 0.931
PCGF6
Polycomb group ring finger 6.
   
 0.930
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.890
CBX5
Chromobox 5.
   
 
 0.889
TRIM28
Tripartite motif containing 28.
    
 0.884
POGZ
Pogo transposable element derived with ZNF domain.
   
 0.866
CHD4
Uncharacterized protein.
   
 0.835
ADNP2
ADNP homeobox 2.
    
 
 0.815
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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