STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCA1Chloride channel accessory 1. (921 aa)    
Predicted Functional Partners:
LIX1
Limb and CNS expressed 1.
   
    0.511
SERPINB2
Serpin family B member 2; Belongs to the serpin family.
    
 0.491
MELTF
Melanotransferrin; Belongs to the transferrin family.
   
 
 0.458
POSTN
Periostin.
      
 0.434
LAMA3
Laminin subunit alpha 3.
    
 0.430
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.426
SLCO1A2
Solute carrier organic anion transporter family member.
   
    0.422
C1orf109
Chromosome 1 open reading frame 109.
   
    0.422
TEX15
Testis expressed 15, meiosis and synapsis associated.
    
 0.418
UGT3A2
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
   0.416
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.