STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SZ45_LOXAFUncharacterized protein. (807 aa)    
Predicted Functional Partners:
NOC3L
Nucleolar complex protein 3 homolog.
   
 
 0.560
TMEM201
Transmembrane protein 201.
    
 
 0.531
DHX36
DEAH-box helicase 36.
    
 0.491
MARCHF9
Membrane associated ring-CH-type finger 9.
   
 
 0.442
SCOC
Short coiled-coil protein.
      
 0.438
GPR149
G protein-coupled receptor 149.
   
 0.436
WDR18
WD repeat domain 18.
   
 0.433
KIF5C
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.422
PSTPIP1
Proline-serine-threonine phosphatase interacting protein 1.
    
 
 0.414
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.