STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRFN3Leucine rich repeat and fibronectin type III domain containing 3. (627 aa)    
Predicted Functional Partners:
FLOT1
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
     
 0.762
FLOT2
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
     
 0.747
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
    
 0.703
ST3GAL4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
    
  0.672
TTC9B
Tetratricopeptide repeat domain 9B.
    
 
 0.611
IRGQ
Immunity related GTPase Q.
    
 0.607
SLC4A7
Anion exchange protein.
     
 0.512
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
     
  0.507
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
    
 0.506
G3T6D0_LOXAF
Uncharacterized protein.
    
 0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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