STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAX1BP1Tax1 binding protein 1. (820 aa)    
Predicted Functional Partners:
TNFAIP3
TNF alpha induced protein 3.
    
 0.983
GABARAP
GABA type A receptor-associated protein.
   
 0.932
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.932
AZI2
Uncharacterized protein.
    
 
 0.831
RNF11
RING-type domain-containing protein.
   
 
 0.784
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.770
CNTN2
Contactin 2.
     
 0.716
TBK1
TANK binding kinase 1.
    
 0.679
ITCH
E3 ubiquitin-protein ligase.
    
 
 0.635
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.619
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.