STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAX1BP1Tax1 binding protein 1. (820 aa)    
Predicted Functional Partners:
TNFAIP3
TNF alpha induced protein 3.
    
 0.996
NBR1
NBR1 autophagy cargo receptor.
   
 0.989
SQSTM1
Sequestosome 1.
   
 0.970
CD3EAP
CD3e molecule associated protein.
   
    0.953
CALCOCO2
Calcium binding and coiled-coil domain 2.
    
 0.945
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.940
FKBP8
Peptidylprolyl isomerase.
    
 0.937
UBB
Ubiquitin B.
   
  0.937
UBC
Uncharacterized protein.
   
  0.937
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.932
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.