STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JAZF1JAZF zinc finger 1. (205 aa)    
Predicted Functional Partners:
MBTD1
Mbt domain containing 1.
    
 
 0.945
YEATS4
YEATS domain containing 4.
    
   0.927
MEAF6
MYST/Esa1 associated factor 6.
    
 
 0.897
TRRAP
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.831
G3U6X7_LOXAF
Uncharacterized protein.
   
 
 0.831
BRD8
Bromodomain containing 8.
    
 
 0.829
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.826
ING3
Inhibitor of growth protein.
   
 
 0.826
EPC1
Enhancer of polycomb homolog.
    
 
 0.824
EPC2
Enhancer of polycomb homolog.
    
 
 0.822
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.