SMCO4 protein (Loxodonta africana) - STRING interaction network

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SMCO4

Single-pass membrane protein with coiled-coil domains 4. (59 aa)

Predicted Functional Partners:

VSTM5

0.674

PDZD11

0.518

C11orf54

0.497

G3U536_LOXAF

0.494

HEPHL1

0.485

F2RL2

0.479

NUDT6

0.445

MED17

0.417

GALNT5

0.413

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C11orf54	G3U536_LOXAF	ENSLAFP00000016441	ENSLAFP00000022944	Chromosome 11 open reading frame 54.	Uncharacterized protein.	0.678
C11orf54	HEPHL1	ENSLAFP00000016441	ENSLAFP00000018127	Chromosome 11 open reading frame 54.	Hephaestin like 1.	0.489
C11orf54	MED17	ENSLAFP00000016441	ENSLAFP00000015581	Chromosome 11 open reading frame 54.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.466
C11orf54	SMCO4	ENSLAFP00000016441	ENSLAFP00000005876	Chromosome 11 open reading frame 54.	Single-pass membrane protein with coiled-coil domains 4.	0.497
C11orf54	VSTM5	ENSLAFP00000016441	ENSLAFP00000016155	Chromosome 11 open reading frame 54.	V-set and transmembrane domain containing 5.	0.585
F2RL2	PDZD11	ENSLAFP00000027423	ENSLAFP00000009287	Coagulation factor II thrombin receptor like 2.	PDZ domain containing 11.	0.415
F2RL2	SMCO4	ENSLAFP00000027423	ENSLAFP00000005876	Coagulation factor II thrombin receptor like 2.	Single-pass membrane protein with coiled-coil domains 4.	0.479
G3U536_LOXAF	C11orf54	ENSLAFP00000022944	ENSLAFP00000016441	Uncharacterized protein.	Chromosome 11 open reading frame 54.	0.678
G3U536_LOXAF	MED17	ENSLAFP00000022944	ENSLAFP00000015581	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.422
G3U536_LOXAF	SMCO4	ENSLAFP00000022944	ENSLAFP00000005876	Uncharacterized protein.	Single-pass membrane protein with coiled-coil domains 4.	0.494
G3U536_LOXAF	VSTM5	ENSLAFP00000022944	ENSLAFP00000016155	Uncharacterized protein.	V-set and transmembrane domain containing 5.	0.577
GALNT5	SMCO4	ENSLAFP00000002942	ENSLAFP00000005876	Polypeptide N-acetylgalactosaminyltransferase.	Single-pass membrane protein with coiled-coil domains 4.	0.413
HEPHL1	C11orf54	ENSLAFP00000018127	ENSLAFP00000016441	Hephaestin like 1.	Chromosome 11 open reading frame 54.	0.489
HEPHL1	SMCO4	ENSLAFP00000018127	ENSLAFP00000005876	Hephaestin like 1.	Single-pass membrane protein with coiled-coil domains 4.	0.485
MED17	C11orf54	ENSLAFP00000015581	ENSLAFP00000016441	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Chromosome 11 open reading frame 54.	0.466
MED17	G3U536_LOXAF	ENSLAFP00000015581	ENSLAFP00000022944	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Uncharacterized protein.	0.422
MED17	SMCO4	ENSLAFP00000015581	ENSLAFP00000005876	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Single-pass membrane protein with coiled-coil domains 4.	0.417
MED17	VSTM5	ENSLAFP00000015581	ENSLAFP00000016155	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	V-set and transmembrane domain containing 5.	0.634
NUDT6	SMCO4	ENSLAFP00000013726	ENSLAFP00000005876	Nudix hydrolase domain-containing protein.	Single-pass membrane protein with coiled-coil domains 4.	0.445
PDZD11	F2RL2	ENSLAFP00000009287	ENSLAFP00000027423	PDZ domain containing 11.	Coagulation factor II thrombin receptor like 2.	0.415

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