STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGEF1Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.999
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
   
 0.999
RAB21
RAB21, member RAS oncogene family.
   
 0.996
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.994
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
 0.969
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.969
RAB22A
RAB22A, member RAS oncogene family.
   
 0.968
GDI1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.966
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.966
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 0.964
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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