STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP14Peptidylprolyl isomerase. (211 aa)    
Predicted Functional Partners:
C17orf75
Chromosome 17 open reading frame 75.
      
 0.829
RAB3IP
Sec2p domain-containing protein.
      
 0.820
AFF2
AF4/FMR2 family member 2.
   
 
 0.812
AFF3
AF4/FMR2 family member 3.
   
 
 0.768
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.711
EFCAB1
EF-hand calcium binding domain 1.
   
 0.690
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.687
GPATCH3
G-patch domain containing 3.
    
 
 0.670
EAF1
ELL associated factor 1.
      
 0.636
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.601
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.