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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC1Armadillo repeat-containing protein 1. (282 aa)    
Predicted Functional Partners:
ABITRAM
Actin binding transcription modulator.
      
 0.587
ARMC12
Armadillo repeat containing 12.
      
 0.563
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
 
 0.535
ARMC6
Armadillo repeat containing 6.
      
 0.522
MTFR1L
Mitochondrial fission regulator 1 like.
    
 
 0.500
TBC1D21
TBC1 domain family member 21.
      
 0.470
GTF3C5
General transcription factor IIIC subunit 5.
   
  
 0.414
MTX2
Metaxin 2.
   
  
 0.412
MRPS25
Mitochondrial ribosomal protein S25.
   
    0.403
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
   
  
 0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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