Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ARMC1Armadillo repeat-containing protein 1. (282 aa)    
Predicted Functional Partners:
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
 
 0.907
MTFR1L
Mitochondrial fission regulator 1 like.
    
 
 0.763
MTX2
Metaxin 2.
   
  
 0.757
SAMM50
SAMM50 sorting and assembly machinery component.
      
 0.667
TBC1D21
TBC1 domain family member 21.
      
 0.621
ARMC12
Armadillo repeat containing 12.
      
 0.608
APEX2
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
   
  
 0.515
STAMBPL1
STAM binding protein like 1.
   
  
 0.504
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
      
 0.496
MRPS25
Mitochondrial ribosomal protein S25.
   
    0.467
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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