Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCB9ATP binding cassette subfamily B member 9. (761 aa)    
Predicted Functional Partners:
G3UDM5_LOXAF
Uncharacterized protein.
   
 0.982
TAPBP
TAP binding protein.
   
 0.966
PDIA3
Protein disulfide-isomerase.
   
 0.908
PSMB9
Proteasome subunit beta.
   
 0.896
TAPBPL
TAP binding protein like.
   
 
 0.859
PSMB8
Proteasome subunit beta.
   
 0.805
ABCF3
ATP binding cassette subfamily F member 3.
  
 0.676
CALR3
Calreticulin 3.
   
 0.668
CALR
Calreticulin.
   
 0.668
G3THW4_LOXAF
Calreticulin.
   
 0.668
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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