Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIPAL2NIPA like domain containing 2. (383 aa)    
Predicted Functional Partners:
NME6
Nucleoside diphosphate kinase.
      
 0.737
MRPL53
Mitochondrial ribosomal protein L53.
      
 0.692
TXNDC16
Thioredoxin domain containing 16.
      
 0.684
WDR74
WD repeat domain 74.
      
 0.680
STXBP4
Syntaxin binding protein 4.
      
 0.646
KHK
Ketohexokinase.
      
 0.619
TTC39A
Tetratricopeptide repeat domain 39A.
   
  
 0.579
TM2D1
TM2 domain containing 1.
      
 0.557
NFYC
Nuclear transcription factor Y subunit gamma.
      
 0.535
HECTD2
HECT domain E3 ubiquitin protein ligase 2.
      
 0.535
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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