STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EMX1Empty spiracles homeobox 1. (258 aa)    
Predicted Functional Partners:
FOXG1
Uncharacterized protein.
   
 0.822
TBR1
T-box brain transcription factor 1.
    
 0.821
SATB2
DNA-binding protein SATB.
   
  
 0.642
CELSR3
Cadherin EGF LAG seven-pass G-type receptor 3; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.627
SST
Somatostatin.
      
 0.589
GATA2
GATA binding protein 2.
   
 
 0.554
LHX1
LIM homeobox 1.
    
 0.545
LHX5
LIM homeobox 5.
    
 0.545
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.533
SEMA6C
Semaphorin 6C; Belongs to the semaphorin family.
   
  
 0.522
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.