STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMX1Empty spiracles homeobox 1. (258 aa)    
Predicted Functional Partners:
TBR1
T-box brain transcription factor 1.
    
 0.709
FOXG1
Uncharacterized protein.
   
 0.703
HOXD13
Homeobox D13.
    
 
0.456
FEZF2
FEZ family zinc finger 2.
   
 
 0.437
PAX6
Paired box 6.
   
 
0.434
OLIG2
Oligodendrocyte transcription factor 2.
   
  
 0.430
SOX10
SRY-box transcription factor 10.
      
 0.406
LEF1
Lymphoid enhancer binding factor 1.
     
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.